A Boox beats a Supernote for marking up PDFs only when the file is long, scanned, or full of figures you have to jump around. NeoReader on a Go 10.3, Note Air, or Tab gives you thumbnails, shapes, a faster scroll mode, and room for a 200-page pack. A Supernote Nomad or Manta beats the Boox when the markup is handwriting in the margin of a normal document and the pen feel matters more than the toolbox. Android is not the advantage if you never open another app.
I mark up PDFs for a living more than I journal. The device that wins is the one that is still accurate on page forty, not the one with the nicer homepage. Those are different PDFs, so the honest answer is split.
When does the Boox actually win?
It wins on the ugly file. A scanned contract with crooked pages, a journal article in two columns, a slide deck exported to PDF, a standards document with diagrams every third page. NeoReader’s sidebar, crop, zoom, and the ability to flip into a fast refresh while you hunt for a paragraph are the features you use. Supernote will open the file and let you write on it. It will feel slower and clumsier the moment you are navigating instead of writing.
Shapes and straight lines are the other Boox win. A box around a clause, an arrow at a figure, a highlight that is a highlight and not a handwriting stroke. Supernote’s pen is better at letters. NeoReader is better at the marks a reviewer makes when they are not trying to produce handwriting. If your “markup” is mostly boxes and underlines, stop comparing notebook philosophy. Buy the Boox.
Screen size joins that. A 10.3-inch Go or Note Air shows more of a letter page than a Nomad. You zoom less, so you write on the sentence instead of on a magnified fragment. The Manta and the larger Supernotes close that gap. The Nomad does not, and a lot of people asking this question are holding a Nomad because it was the Supernote they could carry. For PDF markup only, carry the bigger glass.

When does the Supernote win even if you never take notes?
It wins when the PDF is a document you read in order and annotate in your own hand. A paper, a draft, a chapter. The Supernote pen has more bite, the latency on the first-party reader is low, and you are not fighting a toolbar. Digest, stars, and keywords are markup tools, not notebook toys. They are how you find the sentence you marked last Tuesday without scrolling the PDF like a browser.
Export is the other quiet win. Supernote will hand you a PDF with the handwriting on it, and the digest as text you can file. Boox will also export an annotated PDF. I trust the Supernote path more when the thing I want later is “the three paragraphs I starred,” not “a photocopy of every box I drew.” If your archive is stars and a digest, the Supernote is the markup device. The Boox is the device that drew on the page.
Battery belongs in this column if the job is an hour of careful reading, not an afternoon of flipping. A Supernote sleeps like a notebook. A Boox in fast refresh, with Wi-Fi still associated because you downloaded the PDF that way, does not. For markup only you can turn the radio off after the file is local. People do not. They leave the Boox configured like a tablet and then blame the panel.
What does “PDFs only” rule out?
It rules out the usual Boox sales pitch. You are not getting Kindle, a browser, email, or a second monitor. Those are real reasons to buy a Boox, and they are not this question. If they are secretly the reason, you are not choosing a markup device. You are choosing an Android tablet that can also mark a PDF, and the Supernote will feel limited because it is limited on purpose.
It also rules out the usual Supernote sales pitch. Headings, links between notes, and a notebook you live in do not matter if every job arrives as a PDF and leaves as a PDF. Do not pay for the Supernote’s notebook structure and then only open Document. Pay for the pen and the digest, or do not pay for it.

Where do both of them annoy you?
Color. A color Boox makes highlighter colors visible and makes the page dimmer, so you use the front light, so the battery lie starts. A monochrome Supernote or a monochrome Go makes yellow and pink the same gray. If your markup depends on color meaning, a color Boox is the one that preserves it, and you should expect to charge more often. If your markup is ink, color is a tax.
Very large files. Both will choke on a 500 MB scanned bundle. The Boox chokes later, and it recovers better if you split the PDF on a computer first. Do that split either way. A tablet is a bad place to discover that the sender exported a print-resolution scan of a 90-page report.
Handwriting recognition inside the PDF is a party trick on both. The durable object is the marked PDF plus, on Supernote, the digest you chose. Do not pick a device because a demo turned one sentence into text. Pick it because page forty is still easy to mark and the file you copy back to the laptop contains the marks.
Who should buy which if the shelf is only PDFs?
Buy a Boox Go 10.3 or a Note Air if the PDFs are long, visual, or full of reviewer marks that are shapes. Use NeoReader, turn fast refresh on only while you scroll, and turn it off when you write. Copy files by USB if you want the charge to last the week you are marking.
Buy a Supernote Manta, or an A5-size Supernote, if you write in the margins of documents you actually read, and you want those marks to be findable later without redrawing them. Skip the Nomad for this job unless the PDFs are short. The small page makes markup into constant zooming, and zooming is the thing Supernote is worse at.
Do not buy either one if the PDFs have to be filled as forms with typed fields, checkboxes that a desktop Acrobat expects, and signatures a compliance team will reject unless they are the official signature widget. E-ink markup is handwriting on a page. It is a bad form filler. Do the form on the computer. Bring the tablet for the document you are thinking about, not for the document a portal must ingest as data.
What happens to the marks after they leave the tablet?
Both devices can write the ink into a PDF a laptop will open. That is the test that matters, and it is where people get sentimental and then lose the work. On the Boox, export or share the annotated file and open it in a desktop reader before you delete the original. Some pen marks that looked perfect on e-ink come out as a layer a fussy reviewer tool ignores, or as a flattened image you can no longer move. Open the file. Click a box. If you cannot select it, you have a picture of markup, which is fine for reading and useless for a colleague who expected comments they can reply to.
Supernote’s export is the same honesty check, plus the digest if you starred passages. The digest is text. The handwriting on the PDF is still handwriting. Do not tell someone you “sent notes” if you sent only the digest and they needed the arrow you drew on figure three. Send the PDF. Keep the digest for yourself.
Sync is not a markup feature. Boox cloud, Supernote cloud, Drive, a cable: all of them move a file you already annotated. None of them makes a bad annotation tool into a good one. If you are choosing the Boox because sync feels more familiar, you are choosing a pipe. Choose it for thumbnails and shapes, or do not.
A way to decide with one file you already have
- Pick the worst PDF you marked up last month, not the nicest one.
- If finding a figure and drawing a box was the work, the Boox wins, even if the pen feels drier.
- If writing a sentence in the margin and finding it on Thursday was the work, the Supernote wins, even if scrolling feels slower.
- If you needed both in the same hour, buy the Boox and accept the pen. You will not carry two slabs for one PDF habit.
- Ignore Android, the store, and the notebook templates. You said PDFs only. Hold yourself to that when the spec sheet wanders.
For marking up PDFs only, a Boox beats a Supernote on navigation and drawing tools. A Supernote beats a Boox on the pen and on marks you need to find again. The file in front of you is the decision. The brand debate is what you do instead of opening page forty.